| Anthropology | Ph.D. | Arts & Science | Optional | Dec. 1 |
| Astrophysics | Ph.D. | Arts & Science | Exempt | Dec. 7 |
| Biochemistry | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Biological Sciences | Ph.D. | Arts & Science | Optional | Dec. 1 |
| Biomedical Engineering | M.S. | Engineering | Exempt | Mar. 15 |
| Biomedical Engineering | Ph.D. | Engineering | Exempt | Jan. 1 |
| Biomedical Informatics | M.S. | Sch of Med Non-M.D. | Optional | Dec. 1 |
| Biomedical Informatics | Ph.D. | Sch of Med Non-M.D. | Optional | Dec. 1 |
| Biomedical Sciences | M.S. | Sch of Med Non-M.D. | Exempt | Rolling |
| Biostatistics | M.S. | Sch of Med Non-M.D. | Required | Jan. 1 |
| Biostatistics | Ph.D. | Sch of Med Non-M.D. | Required | Jan. 1 |
| Cancer Biology | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Cell and Developmental Biology | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Chemical and Physical Biology | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Chemical and Biomolecular Engineering | M.S. | Engineering | Exempt | Mar. 15 |
| Chemical Engineering | Ph.D. | Engineering | Exempt | Dec. 15 |
| Chemistry | Ph.D. | Arts & Science | Optional | Jan. 1 |
| Civil Engineering | M.S. | Engineering | Exempt | Mar. 15 |
| Civil Engineering | Ph.D. | Engineering | Exempt | Dec. 1 |
| Cognitive Psychology In Context | M.S. | Peabody College | Optional | Dec. 15 |
| Community Research and Action | Ph.D. | Peabody College | Required | Dec. 1 |
| Computer Science | M.S. | Engineering | Exempt | Dec. 15 |
| Computer Science (Online) | M.S. | Engineering | Exempt | Jun. 30 |
| Computer Science | Ph.D. | Engineering | Exempt | Dec 15 |
| Creative Writing | M.F.A. | Arts & Science | Optional | Dec. 1 |
| Data Science | M.S. | Sch of Med Non-M.D. | Optional | Feb. 15 |
| Earth and Environmental Sciences | M.S. | Arts & Science | Exempt | Jan. 1 |
| Earth and Environmental Sciences | Ph.D. | Arts & Science | Exempt | Jan. 1 |
| Economics (Economic Development) | M.A. | Arts & Science | Required | Feb. 15 |
| Economics | Ph.D. | Arts & Science | Required | Dec. 1 |
| Electrical & Computer Engineering | M.S. | Engineering | Exempt | Mar. 15 |
| Electrical & Computer Engineering | Ph.D. | Engineering | Exempt | Dec. 15 |
| English | Ph.D. | Arts & Science | Exempt | Dec. 1 |
| Environmental Engineering | M.S. | Engineering | Exempt | Mar. 15 |
| Environmental Engineering | Ph.D. | Engineering | Exempt | Dec. 1 |
| Epidemiology | Ph.D. | Sch of Med Non-M.D. | Exempt | Dec. 15 |
| Graduate Department of Religion | M.A. | Divinity | Optional | Dec.1 |
| Graduate Department of Religion | Ph.D. | Divinity | Optional | Dec.1 |
| Health Policy | Ph.D. | Sch of Med Non-M.D. | Exempt | Dec. 15 |
| Hearing and Speech Sciences | Ph.D. | Sch of Med Non-M.D. | Optional | Dec. 1 |
| History | Ph.D. | Arts & Science | Exempt | Dec. 1 |
| Human Genetics | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Interdisciplinary Graduate Program in Biomedical and Biological Sciences [IGP] | Ph.D. | Sch of Med Non-M.D. | Optional | Dec. 1 |
| Interdisciplinary Materials Science | M.S. | Engineering | Exempt | Jan. 15 |
| Interdisciplinary Materials Science | Ph.D. | Engineering | Exempt | Jan. 15 |
| Latin American Studies | M.A. | Arts & Science | Optional | Jan. 15 |
| Law and Economics | J.D./Ph.D. | Arts & Science | Required | Jan. 15 |
| Leadership and Policy Studies | Ph.D. | Peabody College | Required | Dec. 1 |
| Learning, Teaching and Diversity | Ph.D. | Peabody College | Required | Dec. 1 |
| Master of Liberal Arts and Science | M.L.A.S | Arts & Science | Exempt | Rolling |
| Mathematics | M.A. | Arts & Science | Optional | Dec. 1 |
| Mathematics | Ph.D. | Arts & Science | Optional | Dec. 1 |
| Mechanical Engineering | M.S. | Engineering | Exempt | Mar. 15 |
| Mechanical Engineering | Ph.D. | Engineering | Exempt | Jan. 1 |
| Medical Scientist Training Program | M.D./Ph.D. | Sch of Med Non-M.D. | applications through School of Medicine | |
| Medicine, Health and Society | M.A. | Arts & Science | Exempt | Feb. 1 |
| Microbe-Host Interactions (M&IM) | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Molecular Pathology and Immunology (PATH) | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Molecular Physiology and Biophysics | Ph.D. | Sch of Med Non-M.D. | applications through IGP | |
| Neuroscience | Ph.D. | Sch of Med Non-M.D. | Exempt | Dec. 1 |
| Nursing Science | Ph.D. | Sch of Med Non-M.D. | Optional | Jan. 1 |
| Pharmacology | Ph.D. | Sch of Med Non-M.D. | Applications through IGP | |
| Philosophy | Ph.D. | Arts & Science | Optional | Jan. 3 |
| Physics | Ph.D. | Arts & Science | Exempt | Dec. 1 |
| Political Science | Ph.D. | Arts & Science | Optional | Dec. 1 |
| Psychological Sciences | Ph.D. | Arts & Science | Optional | Dec. 1 |
| Psychological Sciences | Ph.D. | Peabody College | Required | Dec. 1 |
| Quantitative and Chemical Biology | Ph.D. | Sch of Med Non-M.D. | Optional | Dec. 1 |
| Sociology | Ph.D. | Arts & Science | Required | Dec. 1 |
| Special Education | Ph.D. | Peabody College | Required | Dec. 1 |